Information for 12-AGCAGGCCGACGG (Motif 23)

C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C G T A T G C A C T G A C T G A T G C A G T C A G C T A C T G A G T C C G A T
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.845
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets61.7 +/- 29.1bp
Average Position of motif in Background48.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGCAGGCCGACGG------
---TGGGCGACGTCGTTAA
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCAGGCCGACGG---
--CAGGCCNNGGCCNN
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCAGGCCGACGG---
--NTGCCCANNGGTNA
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGCAGGCCGACGG
-----CCAGACAG
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGGCCGACGG-
NNTTTANNCGACGNA
 A C G T C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGCAGGCCGACGG--
-----CCAGACRSVB
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGCAGGCCGACGG
-CTAGGCCT----
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGCAGGCCGACGG--
---TGCCCNGGGGCA
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGCAGGCCGACGG
AGGTGNCAGACAG
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGCAGGCCGACGG---
--CCGCCCAAGGGCAG
 C G T A A C T G T G A C C T G A A C T G T A C G T G A C A G T C A T C G C G T A G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G