Information for 3-TCCHGGCWAT (Motif 6)

A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
Reverse Opposite:
C G T A A G C T C G T A C T A G A G T C A G T C C A T G A C T G A C T G G T C A
p-value:1e-12
log p-value:-2.784e+01
Information Content per bp:1.757
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif78.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets57.1 +/- 22.3bp
Average Position of motif in Background53.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCHGGCWAT
TTCAAGGTCAT
 A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCHGGCWAT
TNNGGGCAG-
 A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCHGGCWAT
TTCCNGGAAG-
 A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCCHGGCWAT-
TCAAGGTCATA
 A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCHGGCWAT
ANCAGGATGT
 A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TCCHGGCWAT
NNNCTTTCCAGGAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCHGGCWAT
TTTCCNGGAAAN
 A C G T A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCHGGCWAT-
NCTTCCNGGAAGNN
 A C G T A C G T A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCHGGCWAT-
ATTTCCNGGAAATN
 A C G T A C G T A C G T A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCCHGGCWAT---
--AAGGATATNTN
 A C G T G T A C G T A C G T A C A C T G A C T G A G T C C G A T T C G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T