Information for 2-TCATGGCGGC (Motif 5)

A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
Reverse Opposite:
A C T G A G T C T G A C A C T G A G T C G T A C T G C A A G C T C A T G G T C A
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.833
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif155.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets57.6 +/- 24.3bp
Average Position of motif in Background50.8 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TCATGGCGGC-
TAATGGCGGNC
 A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TCATGGCGGC
CAAGATGGCGGC
 A C G T A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCATGGCGGC
CAAGATGGCGGC
 A C G T A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGCGGC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGCGGC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGCGGC
GTTAATGGCC--
 A C G T A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGCGGC
GTCATN-----
 A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCATGGCGGC---
-TTTGGCGCCAAA
 A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C A C G T A C G T A C G T
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCATGGCGGC
TNNGGGCAG-
 A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCGGC
CTAATKGV---
 A C G T A C G T G T A C C T G A A C G T A C T G A C T G G T A C A C T G T C A G G T A C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T