Information for 8-CAACTTTACG (Motif 15)

A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G
Reverse Opposite:
A G T C C T A G C G A T G T C A C G T A C G T A C T A G A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets65.1 +/- 20.9bp
Average Position of motif in Background44.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa11/MA0911.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAACTTTACG---
-ANTTTTACGACC
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAACTTTACG------
NAATTTTACGAGNTNN
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAACTTTACG------
ANATTTTACGAGNNNN
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAACTTTACG--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAACTTTACG------
NNNATTTTACGACNNTN
 A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACTTTACG
ACCACTTGAA-
 A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAACTTTACG------
ANNTTTTACGACNTNN
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAACTTTACG------
GNNNTTTTACGACCTNA
 A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAACTTTACG---
-DGWTTTATGRCN
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAACTTTACG------
NNNTTTTACGACNTTN
 A G T C C G T A C G T A A G T C A C G T A C G T A C G T C G T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A