p-value: | 1e-10 |
log p-value: | -2.458e+01 |
Information Content per bp: | 1.755 |
Number of Target Sequences with motif | 22.0 |
Percentage of Target Sequences with motif | 2.39% |
Number of Background Sequences with motif | 177.3 |
Percentage of Background Sequences with motif | 0.38% |
Average Position of motif in Targets | 45.2 +/- 25.9bp |
Average Position of motif in Background | 49.1 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0166.1_Six6_2/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- AATAGGGTATCAATATT |
|
|
|
PH0165.1_Six6_1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- AATAGGGTATCAATTAT |
|
|
|
PB0059.1_Six6_1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- AATAGGGTATCATATAT |
|
|
|
Six3/MA0631.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- GATAGGGTATCACTAAT |
|
|
|
PH0163.1_Six3/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- GATAGGGTATCACTAAT |
|
|
|
PH0161.1_Six1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- GATGGGGTATCATTTTT |
|
|
|
PH0162.1_Six2/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGGYATCCA---- AATGGGGTATCACGTTT |
|
|
|
PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGGGYATCCA----- NTNNCGTATCCAAGTNN |
|
|
|
SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGGYATCCA AAGGATATNTN |
|
|
|
HIC2/MA0738.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGGGYATCCA NGTGGGCAT--- |
|
|
|