Information for 1-CGCCATCTTG (Motif 1)

G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
Reverse Opposite:
A G T C G T C A T G C A A C T G C G T A A C G T A T C G A C T G G T A C C T A G
p-value:1e-20
log p-value:-4.725e+01
Information Content per bp:1.855
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif225.0
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets50.9 +/- 26.6bp
Average Position of motif in Background54.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCTTG
GCCGCCATCTTG
 A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCTTG
GCNGCCATCTTG
 A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CGCCATCTTG
GTCCGCCATTA--
 A C G T A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGCCATCTTG-
-GCCATCTGTT
 G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGCCATCTTG----
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Atf3/MA0605.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATCTTG
ACGTCATC---
 A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCCATCTTG-
-ACCATCTGTT
 G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCTTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCCATCTTG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCTTG
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G G T A C A T G C G T C A A C G T G T A C A C G T A C G T T C A G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T A C G T