Information for 10-TCTGCCAAGDGAT (Motif 9)

A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
Reverse Opposite:
G T C A A C G T A G T C G A C T G T A C A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 30.2bp
Average Position of motif in Background39.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
GGTGCCAAGT---
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
-TTGCCAAG----
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTGCCAAGDGAT
--TGCCAA-----
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
CGTGCCAAG----
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCTGCCAAGDGAT
--TGCCCAGNHW-
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
-CTGCCCGCA---
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
-ATGCCCACC---
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTGCCAAGDGAT
-ATGCCAACC---
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTGCCAAGDGAT
GCTGTCAA-----
 A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTGCCAAGDGAT
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C G T A C G T C A C G T A A C T G C G T A A C T G G T C A C A G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T