Information for 9-GGCTTCGGGGCCA (Motif 8)

A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C A G T C A G T C C T A G G T C A C T G A A C T G G T A C A G T C
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 32.4bp
Average Position of motif in Background17.8 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCTTCGGGGCCA-----
-AGCTCGGCGCCAAAAGC
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTTCGGGGCCA-----
-CCTTCGGCGCCAAAAGG
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTCGGGGCCA
TGCCCTNAGGGCA-
 A C G T A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCTTCGGGGCCA--
---TTTGGCGCCAAA
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCGGGGCCA
TGCCCTGAGGGCA-
 A C G T A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCGGGGCCA
TGCCCTGAGGGCA-
 A C G T A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCTTCGGGGCCA
-GCCTCAGGGCAT
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCTTCGGGGCCA-----
-CTCCAGGGGTCAATTGA
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTTCGGGGCCA-----
-NTNNNGGGGTCANGNNN
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTTCGGGGCCA
GGGGGCGGGGCC-
 A C T G A C T G A G T C A G C T A C G T A G T C C T A G A C T G A C T G A C T G A G T C A G T C C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T