Information for 4-CAGGCGGCAGCGG (Motif 4)

T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G
Reverse Opposite:
A T G C G T A C A C T G A G T C G A C T A C T G A G T C G A T C A T C G A T G C A G T C G C A T A T C G
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.757
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif285.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets49.1 +/- 28.0bp
Average Position of motif in Background48.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG---
--GGCGGGGGCGGGGG
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T A C G T
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGCGGCAGCGG--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG-
CAGGCCNNGGCCNN
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG--
---NNAGCAGCTGCT
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG--
--NGNGACAGCTGCN
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG-----
-NNNNAGCAGCTGCTGAN
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGCGGCAGCGG
TGTCAGGGGGCG----
 A C G T A C G T A C G T T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG-
ANTGCGGGGGCGGN
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG
--CGCAGCTGCG-
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGGCGGCAGCGG--
-----AGCAGCTGCT
 T A G C C G T A C T A G T A C G T A G C C T A G A C T G A G T C C T G A A C T G T A G C C A T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T