Information for 17-GACCTGACTA (Motif 32)

A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C T G A C G T A G T C
p-value:1e-1
log p-value:-3.433e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 24.5bp
Average Position of motif in Background33.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCTYA---
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACTA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCT-----
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACTA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
NCACCTGTN--
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACCTGACTA
-NCGTGACN-
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTGACTA-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACTA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTA--
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACCTGACTA
RYHYACCTGB---
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T