Information for 15-CAATCACACG (Motif 30)

A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.067e+00
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.8 +/- 19.9bp
Average Position of motif in Background47.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
CCAATCAA---
 A C G T A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
CAAATCACTG-
 A C G T A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CAATCACACG-
---TCACACCT
 A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG-
NWAACCACADNN
 A C G T A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAATCACACG-
---TCACACCT
 A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
NAAACCACAG-
 A C G T A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAATCACACG
AAACCACANN
 A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAATCACACG
CCATCAATCAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAATCACACG
AAACCACAGC
 A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAATCACACG-
---TCACACCT
 A G T C C G T A C G T A A G C T A G T C C G T A A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T