Information for 3-GGCTCCTTCCCAG (Motif 3)

A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G A C T G C G T A C T G A A C T G A T C G C G T A A C T G T A G C A G T C
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 14.2bp
Average Position of motif in Background46.1 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCTCCTTCCCAG-
----HTTTCCCASG
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GGCTCCTTCCCAG---
------TGCCCAGNHW
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCCTTCCCAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCTCCTTCCCAG---
-----TTTCCCAGAAN
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTCCTTCCCAG----
NNNTCCATCCCATAANN
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCTCCTTCCCAG
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTCCTTCCCAG--
----ATTTCCAAGAA
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTCCTTCCCAG
KGCCCTTCCCCA-
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCTCCTTCCCAG
----GCTTCC---
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCTCCTTCCCAG
-GGTCCCGCCC--
 A C T G A C T G A G T C A C G T A T G C A G T C A G C T A C G T A G T C A G T C A G T C C G T A A C T G
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T