Information for 10-AGTAGTGTCA (Motif 26)

C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A G T C C G T A A G T C A C G T C G T A A G T C A C G T
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.942
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 26.9bp
Average Position of motif in Background62.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AGTAGTGTCA-
----NTGTCAN
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGTAGTGTCA-----
TNNNNGGTGTCATNTNT
 A C G T A C G T C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGTAGTGTCA---
-----TGTCANYT
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTAGTGTCA--
--AGGTGTGAAM
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGTAGTGTCA---
---VBTGWCAGCB
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTAGTGTCA-
---CCTGTCAA
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTAGTGTCA----
AGAGCGGGGTCAAGTA
 A C G T A C G T C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGTAGTGTCA--
----YTGWCADY
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTAGTGTCA--
-AAGGTGTGAAA
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTAGTGTCA
--AGGTGTCA
 C G T A C T A G A C G T C G T A A C T G A C G T A C T G A C G T A T G C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A