Information for 7-BAMGGDYYTG (Motif 23)

A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G
Reverse Opposite:
G T A C T G C A C T A G C T A G G T A C G A T C T A G C A C T G G A C T T G C A
p-value:1e-6
log p-value:-1.537e+01
Information Content per bp:1.455
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.9 +/- 26.3bp
Average Position of motif in Background56.9 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:BAMGGDYYTG----
----GGTCTGGCAT
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:BAMGGDYYTG-
---NNNANTGA
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:BAMGGDYYTG--
------GCTGTG
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:BAMGGDYYTG-
-VBSYGTCTGG
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:BAMGGDYYTG--
--ACATCCTGNT
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-BAMGGDYYTG-----
NNGCGTGTGTGCNGCN
 A C G T A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:BAMGGDYYTG---
---TTGCGTGCVA
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:BAMGGDYYTG-----
GGNGCGNCTGTTNNN
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:BAMGGDYYTG---
-GGGGGTGTGTCC
 A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--BAMGGDYYTG---
NANAAGGGCGTGGTC
 A C G T A C G T A C G T C T G A T G A C A T C G C T A G C A T G G A T C G A T C A C G T C A T G A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C