Information for 5-GGTTTCGGAC (Motif 20)

A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C
Reverse Opposite:
C T A G A C G T A G T C A G T C A C T G C G T A G T C A G T C A T A G C G T A C
p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.738
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif158.3
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets55.3 +/- 29.3bp
Average Position of motif in Background49.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTCGGAC--
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGTTTCGGAC--
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCGGAC
TGGTTTCAGT-
 A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCGGAC---
NTGGTTTCGGTTNNN
 A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GGTTTCGGAC
AGTTTCGGTTTCGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCGGAC----
ANNTTTTACGACNTNN
 A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGTTTCGGAC-
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGTTTCGGAC
ANTTTCGCTTTCGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCGGAC----
NNGTTTTACGACTTTA
 A C G T A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCGGAC-
AGGTGHCAGACA
 A C G T A C T G A T C G A C G T A C G T C G A T G T A C C T A G T C A G G T C A G A T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A