Information for 2-TGCAAAAWSCAGS (Motif 2)

A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A T C G T A G C C G A T A C G T A C G T A C G T A C G T A C T G A T G C C G T A
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.885
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.5 +/- 16.4bp
Average Position of motif in Background52.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGCAAAAWSCAGS
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCAAAAWSCAGS
ATGCATAATTCA--
 A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCAAAAWSCAGS
TGGAAAA------
 A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAAAWSCAGS
AATGGAAAAT-----
 A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAAAWSCAGS
NATGGAAAAN-----
 A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCAAAAWSCAGS-
ATGCATWATGCATRW
 A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAAWSCAGS
TTATGCAAAT------
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAAWSCAGS
ATTGCACAATA----
 A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAAWSCAGS
ATATGCAAAT------
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAAWSCAGS
GGTGCCAAGT-----
 A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A G C A T A T C G A T G C C G T A A C T G A T C G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T