Information for 4-GGCTGGTGTCCGGACC (Motif 12)

A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
Reverse Opposite:
A T C G A C T G C G A T A G T C A G T C C T A G A C T G G T C A A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 30.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTGGTGTCCGGACC--
-NNTNNTGTCTGGNNTNG
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCTGGTGTCCGGACC
GACAGGTGTN------
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGGTGTCCGGACC
SDGCAGGTGCNS-----
 A C G T A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGCTGGTGTCCGGACC
------TGTCTAGACG
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGCTGGTGTCCGGACC
-----CTGTCTGG---
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCTGGTGTCCGGACC
NNCAGGTGNN------
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGCTGGTGTCCGGACC
AAGGCCAGATGGTCCGG--
 A C G T A C G T A C G T A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGCTGGTGTCCGGACC
---VBSYGTCTGG---
 A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGTGTCCGGACC
TWGTCTGV----------
 A C G T A C G T A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GGCTGGTGTCCGGACC
TGACAGGTGTCA-----
 A C G T A C T G A T C G A G T C A C G T A C T G C T A G A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A G T C A T G C
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T A C G T A C G T