Information for 2-ACTYTATTCS (Motif 10)

C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
Reverse Opposite:
T A C G A T C G C G T A G T C A C A G T C T G A T C A G G T C A C T A G G C A T
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.674
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif408.3
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets44.0 +/- 29.1bp
Average Position of motif in Background51.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTYTATTCS
RSCACTYRAG---
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACTYTATTCS
MRSCACTYAA----
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACTYTATTCS-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTYTATTCS
CCACTTGAA---
 A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTYTATTCS
AASCACTCAA----
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTYTATTCS
NSCACTYVAV---
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACTYTATTCS-----
AATCGTTAATCCCTTTA
 A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACTYTATTCS-
-TKCTGTTCCA
 C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACTYTATTCS
AAGCACTTAA----
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTYTATTCS
YCTTTGTTCC
 C G T A A G T C A C G T A G T C A G C T G T C A C A G T C G A T A T G C A T G C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C