Information for 1-CRCTSCTCCTGGG (Motif 1)

A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G
Reverse Opposite:
G A T C A G T C A G T C C T G A C T A G A T C G C G T A A C T G T A G C T C G A A C T G G A T C A C T G
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.788
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 27.0bp
Average Position of motif in Background43.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CRCTSCTCCTGGG
CNGTCCTCCC---
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CRCTSCTCCTGGG---
-ACCACTCTCGGTCAC
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG
-CCCCCTGCTGTG
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG---
-TCNCCTGCTGNGNNN
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG---
-TNTCCTGCTGTGNNG
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG---
----TCCCCTGGGGAC
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CRCTSCTCCTGGG-
GGCCYCCTGCTGDGH
 A C G T A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CRCTSCTCCTGGG--
-----WDNCTGGGCA
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG
--CTGTTCCTGG-
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CRCTSCTCCTGGG----
--RGSMTBCTGGGAAAT
 A G T C C T A G A G T C A G C T A T C G G T A C A C G T A T G C A G T C A G C T A C T G A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T