Information for 4-CGCRRTGCCT (Motif 3)

A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
Reverse Opposite:
C T G A C A T G A T C G T G A C G T C A G A C T A G T C C T A G A G T C T C A G
p-value:1e-32
log p-value:-7.562e+01
Information Content per bp:1.668
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif12.94%
Number of Background Sequences with motif1400.7
Percentage of Background Sequences with motif3.03%
Average Position of motif in Targets52.7 +/- 22.7bp
Average Position of motif in Background49.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCRRTGCCT
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCRRTGCCT--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCRRTGCCT-
CTCTCGCGAGATCTG
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCRRTGCCT---
----ATGCCCACC
 A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCRRTGCCT------
GGGTGTGCCCAAAAGG
 A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCRRTGCCT
CACGCA------
 A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGCRRTGCCT--
TACCCACAATGCATTG
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

CEBPG/MA0838.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGCRRTGCCT
ATTGCGCAAT----
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T A C G T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CGCRRTGCCT
ATTGCGCAAT----
 A C G T A C G T A C G T A C G T A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCRRTGCCT
--CNAGGCCT
 A G T C C T A G A G T C T C A G C T G A A C G T A C T G T A G C G T A C A G C T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T