Information for 19-RCMTWCTSAGGGA (Motif 25)

C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A T C G C G T A A C T G C G T A C G T A C A G T A C T G A G C T
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.2 +/- 22.1bp
Average Position of motif in Background56.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RCMTWCTSAGGGA
---TTCTNMGGAA
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RCMTWCTSAGGGA---
-ANTTCTCAGGAANNN
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RCMTWCTSAGGGA--
---TTCTNNAGAANT
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RCMTWCTSAGGGA--
---TCCCNNGGGACN
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RCMTWCTSAGGGA
-CCTGCTGAGH--
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RCMTWCTSAGGGA--
---TCCCCTGGGGAC
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RCMTWCTSAGGGA
TNTCCTGCTGTGNNG
 A C G T A C G T C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RCMTWCTSAGGGA
TCNCCTGCTGNGNNN
 A C G T A C G T C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RCMTWCTSAGGGA--
-ATTCCCAAGGGAAT
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A A C G T A C G T
A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RCMTWCTSAGGGA
-CCATATATGGNA
 C T G A A G T C G T A C A C G T C G A T A G T C A C G T T A G C C G T A A C T G A C T G A C T G C G T A
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A