Information for 10-TGTATATGAR (Motif 17)

A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
Reverse Opposite:
G A T C A C G T A G T C C T G A A C G T G C T A A C G T C T G A A G T C C G T A
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.858
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif68.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets52.1 +/- 29.1bp
Average Position of motif in Background47.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXG1/MA0613.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTATATGAR
TTGTTTAC---
 A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTATATGAR
TTGTTTAC---
 A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTATATGAR
WATGCAAATGAG
 A C G T A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTATATGAR
ATGMATATDC-
 A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTATATGAR
TGTTTAC---
 A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTATATGAR--
NTTGTTTACGTTNN
 A C G T A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

FOXO6/MA0849.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTATATGAR
TGTTTAC---
 A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
A G C T T C A G A C G T C A G T A C G T G C T A A G T C A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTATATGAR
ATATGCAAATNNN
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTATATGAR
NVWTGTTTAC---
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTATATGAR---
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G T A C G A T C G T A A G C T A C T G C G T A C T A G A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C