Information for 4-GGCGGCCAGGGAA (Motif 6)

A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A
Reverse Opposite:
A G C T A G C T A G T C A G T C A G T C A G C T A C T G A T C G A T G C T G A C A T C G A T G C A G T C
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.795
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif48.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.3 +/- 31.4bp
Average Position of motif in Background54.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCGGCCAGGGAA--
KGTTGCTAGGMAACA
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCGGCCAGGGAA-
NGTTGCCATGGCAA
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCGGCCAGGGAA
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCGGCCAGGGAA-
----NACAGGAAAT
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCGGCCAGGGAA--
-GTTGCCATGGNAAC
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCGGCCAGGGAA-
GGTTGCCATGGCAA
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGCGGCCAGGGAA--
-----CSTGGGAAAD
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCGGCCAGGGAA--
RGSMTBCTGGGAAAT
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGCGGCCAGGGAA-
----NACAGGAAAT
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCGGCCAGGGAA
-GTCCCCAGGGGA
 A C T G A T C G A T G C A C T G A T C G A T G C G T A C C T G A A C T G A C T G T C A G T C G A C T G A
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A