Information for 2-GGTAAARRSCCAK (Motif 3)

C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A C T G A T G C A G C T A G T C A C G T A C G T A C G T C G T A A G T C A G T C
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.3 +/- 30.5bp
Average Position of motif in Background87.4 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTAAARRSCCAK---
GGGRAARRGRMCAGMTG
 A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK-
GGGGTCAAAGTCCAAT
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK
GGGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK
GGGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK
GAGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK
GGGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTAAARRSCCAK
-GTAAACA-----
 C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTAAARRSCCAK
GAGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTAAARRSCCAK
DGTAAACA-----
 C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTAAARRSCCAK
NDGTAAACARRN--
 A C G T C T A G A C T G A C G T C G T A C G T A C G T A T C A G C T G A A T C G A G T C A G T C C G T A A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A A C G T A C G T