Information for 12-GACAAACAAC (Motif 21)

A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.745e+01
Information Content per bp:1.896
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.6 +/- 28.5bp
Average Position of motif in Background58.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GACAAACAAC---
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACAAACAAC
-GTAAACAA-
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C
A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GACAAACAAC--
--RNAACAATGG
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GACAAACAAC-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACAAACAAC--
--AAAACAAAGG
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACAAACAAC
-GTAAACAAT
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACAAACAAC-----
AACAAACAACAAGAG
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GACAAACAAC
----AACAAT
 A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACAAACAAC----
AAAGTAAACAAAAATT
 A C G T A C G T A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GACAAACAAC---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C T G C G T A G T A C G T C A G T C A C G T A A G T C C G T A C G T A G T A C A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C