Information for 11-GCCSCAGGKGGGC (Motif 17)

A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
Reverse Opposite:
T C A G G A T C G T A C G T A C T G C A G A T C A T G C C A G T A C T G T A C G A T C G C A T G A T G C
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.659
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif543.5
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets54.4 +/- 24.5bp
Average Position of motif in Background48.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCSCAGGKGGGC
CACCCCCGGGGGGG
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCCSCAGGKGGGC
ACCCCCCCGGGGGGN
 A C G T A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCCSCAGGKGGGC
CCCCCCCGGGGGGGT
 A C G T A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCSCAGGKGGGC-------
GCCASCAGGGGGCGCYVNNG
 A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCSCAGGKGGGC
GTCCCCAGGGGA--
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCSCAGGKGGGC
TGCCCTGAGGGCA-
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCSCAGGKGGGC
TGCCCTNAGGGCA-
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCSCAGGKGGGC
TGCCCTNAGGGCA-
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCSCAGGKGGGC
CGCCTCAGGCA---
 A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCSCAGGKGGGC
NCNCAGCGGGGGGTC
 A C G T A C G T A T C G G A T C A T G C A T G C A G T C G C T A A T C G C T A G A C G T C A T G C A T G C T A G A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C