Information for 2-CCCCGCCCAACCT (Motif 3)

G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A C G T A C G T A C T G A C T G A C T G G T A C A C T G A C T G C T A G A C T G
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.2 +/- 20.1bp
Average Position of motif in Background40.5 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCAACCT
GCCCCGCCCC----
A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCAACCT
GCCCCACCCA----
A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCCAACCT
CTATCCCCGCCCTATT-
A C G T A C G T A C G T A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCAACCT
GCCMCGCCCMCY--
A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCCCGCCCAACCT
NRGCCCCRCCCHBNN-
A C G T A C G T A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCCCGCCCAACCT
CCCCCCCC-----
G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCCAACCT
TCGACCCCGCCCCTAT-
A C G T A C G T A C G T A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCAACCT
GCTCCGCCCMCY--
A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCAACCT
GCCMCRCCCH----
A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCCAACCT
TACGCCCCGCCACTCTG
A C G T A C G T A C G T A C G T G T A C A G T C A G T C A G T C A C T G A G T C A G T C A G T C C G T A C G T A A G T C A T G C A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G