Information for 1-YCGCYGMGGSTTTTTG (Motif 1)

A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A C G T A C G T A C G T A A T C G A G T C G T A C C A T G A T G C C T A G A C T G A G T C C T A G C T A G
p-value:1e-17
log p-value:-4.047e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 30.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:YCGCYGMGGSTTTTTG-
--GGNGCGNCTGTTNNN
 A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-YCGCYGMGGSTTTTTG
GGGGCCGAGGCCTG---
 A C G T A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--YCGCYGMGGSTTTTTG
CTTCGCGGGGGGTC----
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.47
Offset:1
Orientation:forward strand
Alignment:YCGCYGMGGSTTTTTG
-GTCTGTGGTTT----
 A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:YCGCYGMGGSTTTTTG
--NNTGTGGTTT----
 A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:YCGCYGMGGSTTTTTG
-TACTTCCGCTTTTT-
 A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--YCGCYGMGGSTTTTTG
NTCCCCTCAGGGANT---
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:YCGCYGMGGSTTTTTG------
-------ANATTTTTGCAANTN
 A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--YCGCYGMGGSTTTTTG
NTCGCCTCAGGCAAT---
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-YCGCYGMGGSTTTTTG
NNNNATGCGGGTNNNN-
 A C G T A G T C A G T C A C T G A G T C A G T C A T C G G T A C A C T G A C T G A T G C A C G T A C G T A C G T A G C T A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T