Information for 1-GAGAACATGC (Motif 3)

C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
Reverse Opposite:
A C T G T G A C G T C A C G A T A T C G G C A T C A G T A G T C G C A T G T A C
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.725
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif548.5
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets53.1 +/- 29.9bp
Average Position of motif in Background50.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGAACATGC
AAGCACATGG
 C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGAACATGC
CCAGGAACAG--
 A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GAGAACATGC-
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGAACATGC
TTCTAGAACGTTC
 A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGAACATGC
GGGTACGTGC
 C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAGAACATGC
TATCATTAGAACGCT-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAGAACATGC---
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGAACATGC-------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGAACATGC
TTCTAGAACGTTC
 A C G T A C G T A C G T C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAACATGC--
SNGCACCTGCHS
 C A T G C G T A A C T G G T C A C G T A A T G C G C T A A C G T A C T G T G A C A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C