Information for 9-AAYGAGGMGA (Motif 21)

C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
Reverse Opposite:
C G A T A T G C A C T G A T G C A G T C C A G T A G T C T C A G C A G T C G A T
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.664
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.53%
Number of Background Sequences with motif1479.9
Percentage of Background Sequences with motif3.01%
Average Position of motif in Targets45.8 +/- 26.4bp
Average Position of motif in Background51.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAYGAGGMGA
--TRAGGTCA
 C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAYGAGGMGA
AAYTAGGTCA
 C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAYGAGGMGA
--TGGGGA--
 C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAYGAGGMGA-
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAYGAGGMGA-
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAYGAGGMGA
---GTGGAT-
 C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------AAYGAGGMGA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAYGAGGMGA
NTAATGAGCT--
 A C G T A C G T C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAYGAGGMGA
CACGTGGC--
 C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAYGAGGMGA-
AAGATGATGTCAT
 A C G T A C G T C G T A G T C A A G T C A C T G G T C A C T A G A T C G T G A C A T C G G C T A A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T