Information for 7-TGGTTGTTAC (Motif 18)

A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 16.8bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGGTTGTTAC--
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTGTTAC--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGTTGTTAC---
--NTTGATACATT
 A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTTGTTAC--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGTTGTTAC
--ATTGTTA-
 A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGTTAC----
NNCGTTGCTATGGNN
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGTTAC----
NCCGTTGCTANGNGN
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGTTAC----
NCNTTTGTTATTTNN
 A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGTTGTTAC
--ATTGTT--
 A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGTTGTTAC-
--ATTGTTTAN
 A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C