Information for 6-ACGGACAGTA (Motif 17)

C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G A C G T A G T C A G T C A T C G G A C T
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.865
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.2 +/- 26.2bp
Average Position of motif in Background54.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGGACAGTA
CCAGGAACAG--
 A C G T A C G T C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACGGACAGTA------
ATTTACAGTAGCAAAA
 C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACGGACAGTA------
ATGTACAGTAGCAAAG
 C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACGGACAGTA
AATGGAAAAT-
 A C G T C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACGGACAGTA
NNTGGAAANN-
 A C G T C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACGGACAGTA
GAAAGTGAAAGT-
 A C G T A C G T A C G T C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACGGACAGTA
---CACAGN-
 C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACGGACAGTA--
---GACAATGNN
 C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACGGACAGTA
-TTGACAG--
 C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACGGACAGTA-
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T C G T A T A G C A C T G A C T G C G T A G T A C C G T A A C T G A C G T T G C A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A