Information for 2-GTGGGATTDGGAG (Motif 4)

A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A G T C G T A C G T C A C G T A A C G T A G T C A G T C A G T C C G T A A G T C
p-value:1e-11
log p-value:-2.723e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 24.4bp
Average Position of motif in Background29.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTGGGATTDGGAG-
--GGGAATTGTAGT
 A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTGGGATTDGGAG
TGCGGAGTGGGACTGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGATTDGGAG
CSTGGGAAAD----
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGGATTDGGAG--
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGGATTDGGAG--
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGGGATTDGGAG--
AGGGGGATTAGCTGCC
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGGGATTDGGAG
GGCGGGAARN----
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTGGGATTDGGAG
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGGGATTDGGAG
--TGGAACAGMA-
 A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGATTDGGAG
RGTGGGYGTGGC--
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G A T A C G T C A T G A C T G A T C G C G T A A C T G
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T