Information for 14-GGCGTCCYAGCMACAG (Motif 24)

A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
Reverse Opposite:
G T A C A G C T A T C G A C G T A C G T A C T G A G T C A C G T C T G A A C T G A C T G C G T A A G T C T C A G A G T C A T G C
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.759
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 31.8bp
Average Position of motif in Background44.9 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG
----SCCTAGCAACAG
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG
TGTTKCCTAGCAACM-
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG-
--CCGCATAGCAACGGA
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG-
--TACCATAGCAACGGT
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G A C G T
A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCGTCCYAGCMACAG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCGTCCYAGCMACAG
AAGGKGRCGCAGGCA---
 A C G T A C G T A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG
------CCAGGAACAG
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG
GTTGCCATGGCAAC--
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCGTCCYAGCMACAG
-GAGSCCGAGC-----
 A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGCGTCCYAGCMACAG
TTGGGGGCGCCCCTAG-----
 A C G T A C G T A C G T A C G T A C G T A T C G T C A G A G T C A C T G G A C T A G T C A G T C A G C T C G T A C T A G T A G C G T C A G T C A A T G C C T G A A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T A C G T A C G T