Information for 4-GCTGGCCTTC (Motif 20)

C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C
Reverse Opposite:
T A C G C G T A G T C A C T A G A T C G A G T C T G A C C G T A C A T G G A T C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.683
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif1354.2
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets47.3 +/- 26.9bp
Average Position of motif in Background49.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTGGCCTTC-----
GCTGACCTTGAACTN
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTGGCCTTC
BNTGDCCTTG
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGCCTTC
NNACTTGCCTT-
 A C G T A C G T C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTTC--
--TGACCTTGAV
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTTC--
--TGACCTTGAN
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTTC
-GTGACCTT-
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTTC-
-ATGACCTTGA
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTGGCCTTC-
-NTGACCTTGA
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTTC-
-CTGACCTTTG
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCTGGCCTTC-
-----GCTTCC
 C T A G G T A C G C A T A C T G C T A G T A G C G A T C C A G T G C A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C