Information for 2-CAGGGGCTGAGGCGGC (Motif 7)

A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
Reverse Opposite:
A C T G G T A C A G T C A T C G A G T C A G T C A C G T A T G C C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 25.5bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGGGGCTGAGGCGGC
--GGGGCCCAAGGGGG
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGGGGCTGAGGCGGC
---NGCCTGAGGCN--
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGGGGCTGAGGCGGC
---TGCCTGAGGCN--
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGGGCTGAGGCGGC
-ATGCCCTGAGGC---
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGGGGCTGAGGCGGC
---NGCCTNAGGCN--
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGGGGCTGAGGCGGC
-WTGSCCTSAGGS---
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGGGGCTGAGGCGGC-
-----GCTGASTCAGCA
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGGGGCTGAGGCGGC
AAGAGGATTAG-----
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGGGGCTGAGGCGGC
-RGTGGGYGTGGC---
 A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGGCTGAGGCGGC
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A T C G C G T A C T A G C T A G A T G C A C T G A C T G A G T C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T