Information for 5-GCGTGACGTGGTG (Motif 13)

A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A G T C C T G A A T G C A C T G A C G T A G T C C T G A A G T C A C T G A G T C
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 31.3bp
Average Position of motif in Background38.0 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGTGACGTGGTG
NCGTGACN-----
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCGTGACGTGGTG
---TGACGT----
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTGACGTGGTG
TGCGTG--------
 A C G T A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGTGACGTGGTG-
NGATGACGTGGCAN
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

PAX1/MA0779.1/Jaspar

Match Rank:5
Score:0.62
Offset:-9
Orientation:reverse strand
Alignment:---------GCGTGACGTGGTG
NGCANTCATGCGTGACG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCGTGACGTGGTG
--ATGACGTA---
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.60
Offset:-9
Orientation:reverse strand
Alignment:---------GCGTGACGTGGTG
TGCAGTCATGCGTGACG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGTGACGTGGTG--
-GATGACGTGGCANT
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTGACGTGGTG
TCAGNGAGCGTGAC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGTGACGTGGTG
-GGTCACGTGA--
 A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T C G A G C T A C T G A C T G A C G T A C T G
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T