Information for 2-KCTCAGCGGTTAC (Motif 3)

A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
Reverse Opposite:
A T C G A C G T G T C A C G T A A G T C A G T C A C T G A G T C A C G T A C T G C G T A C T A G G T A C
p-value:1e-13
log p-value:-3.195e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 27.8bp
Average Position of motif in Background21.3 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
---CAGCTGTT--
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--KCTCAGCGGTTAC
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
-ATCAGCTGTT--
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
--ACAGCTGTTV-
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KCTCAGCGGTTAC
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
--CCAGCTGTTN-
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
---BRRCVGTTDN
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A C G T A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KCTCAGCGGTTAC---
TCTCAAAGGTCACCTG
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KCTCAGCGGTTAC
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KCTCAGCGGTTAC
NNGCAGCTGTT--
 A C T G A G T C A C G T A G T C C G T A A C T G G T A C A C T G A C T G A C G T A C G T C G T A A T G C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T