Information for 13-GCGTAACCCTCCA (Motif 17)

A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A
Reverse Opposite:
G A C T A C T G A C T G C G T A A C T G A C T G C T A G A C G T A C G T G T C A A T G C A C T G A G T C
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.765
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets69.0 +/- 23.7bp
Average Position of motif in Background57.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGTAACCCTCCA
--TTCCCCCTAC-
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A
A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCGTAACCCTCCA-
----CCCCCCCCAC
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGTAACCCTCCA--
NNAGTCCCACTCNNNN
 A C G T A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCGTAACCCTCCA--
NNNNGGTACCCCCCANN
 A C G T A C G T A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGTAACCCTCCA----
-CCCCCCCCCCCACTTG
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGTAACCCTCCA-----
-TACGCCCCGCCACTCTG
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGTAACCCTCCA--
AGGCTAATCCCCAANG
 A C G T A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGTAACCCTCCA-----
-ANNTNCCCACCCANNAC
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCGTAACCCTCCA
GGGGATTCCCCC-
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCGTAACCCTCCA
----CCCCCCCC-
 A C T G A G T C A T C G A C G T G T C A G T C A A G T C G T A C A G T C C G A T A G T C A G T C C T G A
A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T