Information for 6-GAGATCAACA (Motif 14)

A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G A T A C T G C T G A A C G T A G T C A C G T A G T C
p-value:1e-7
log p-value:-1.814e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.8 +/- 30.8bp
Average Position of motif in Background52.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGATCAACA-
---GTAAACAA
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGATCAACA-
-DGATCRATAN
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGATCAACA
-AAATAAACA
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGATCAACA---
-AAACAAACATTC
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGATCAACA
---GTAAACA
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGATCAACA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGATCAACA-
WWATRTAAACAN
 A C G T A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGATCAACA----
AAAGATCAAAGGGTT
 A C G T A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGATCAACA---
-ATGTAAACADGS
 A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGATCAACA
HNRAATCAAT-
 A C G T A C T G C G T A A C T G C G T A A G C T A G T C C G T A C G T A A G T C C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T