Information for 8-AACAACRAATATA (Motif 12)

C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T C G A T G A T C C T A G A C G T A G C T C T A G A G C T A G C T
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.778
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 23.8bp
Average Position of motif in Background64.6 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACAACRAATATA--
---DCYAAAAATAGM
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACAACRAATATA--
AACAAACAACAAGAG
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACAACRAATATA-
NNNTAACAATTATAN
 A C G T C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AACAACRAATATA--
---KCCAAAAATAGC
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACAACRAATATA---
-ATGCTAAAAATAGAA
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AACAACRAATATA--
---GCTAAAAATAGC
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAACRAATATA
ACCGGCAATTAATAAA
 A C G T A C G T A C G T C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AACAACRAATATA-
----CCAAAAATAG
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A A C G T
A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AACAACRAATATA
ATTTACGACAAATAGC
 A C G T A C G T A C G T C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACAACRAATATA
-GCAATAAAAA--
 C T G A C T G A A G T C C T G A C G T A A G T C C T A G C G T A C G T A C G A T C G T A C G A T C G T A
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T