Information for 2-CCWTACGTCT (Motif 9)

A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
Reverse Opposite:
C G T A A T C G G C T A T G A C A T C G A C G T C T G A G C A T A C T G T C A G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.768
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif5.73%
Number of Background Sequences with motif269.5
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets39.2 +/- 19.1bp
Average Position of motif in Background51.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCWTACGTCT
ACCATATGGC-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCWTACGTCT
ACCATATGGT-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCWTACGTCT
AACATATGTC-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCWTACGTCT
ACCATATGTT-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCWTACGTCT------
TTTTACGACTTTCCAT
 A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCWTACGTCT
ACCATATGTT-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCWTACGTCT
ACCATATGGT-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCWTACGTCT
ANCATATGTT-
 A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCWTACGTCT
NAACATATGTTT
 A C G T A C G T A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCWTACGTCT
CCATATGT--
 A G T C A G T C C G T A A G C T C G T A T A G C A C T G C A G T A T G C C G A T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T