Information for 5-TCTGCATAAAGGM (Motif 8)

C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
Reverse Opposite:
C A T G G A T C G T A C G C A T C G A T G A C T G T C A A C G T C T A G G T A C C G T A C T A G C G T A
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.594
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.25%
Number of Background Sequences with motif766.4
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets46.8 +/- 29.0bp
Average Position of motif in Background48.3 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TCTGCATAAAGGM
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCTGCATAAAGGM-
----GCTAATTGCT
 C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C A C G T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTGCATAAAGGM
ATTTGCATAA----
 A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATAAAGGM
CAATTGCAAAAATAT
 A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCATAAAGGM
AATTTGCATANT---
 A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCATAAAGGM
TAATTTGCATAA----
 A C G T A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCATAAAGGM
AAATTAGCATAAT---
 A C G T A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCTGCATAAAGGM-
----GCTAAACGGT
 C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C A C G T
A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCATAAAGGM
TAATTTGCATAA----
 A C G T A C G T A C G T C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCTGCATAAAGGM
-----CTAATKGV
 C G A T G A T C C G A T C A T G A G T C T G C A C A G T C G T A C G T A C G T A A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C