Information for 3-GCGACVTGTCCTTCCC (Motif 5)

A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G C G T A C G T A C T A G C T A G C G T A A G T C C T G A A G T C A T C G A G C T A T G C A C T G A G T C
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.799
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 23.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCGACVTGTCCTTCCC--
------KGCCCTTCCCCA
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGACVTGTCCTTCCC
GCCACGTGT-------
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGACVTGTCCTTCCC
CNGACACCTGTTCNNN--
 A C G T A C G T A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGACVTGTCCTTCCC
AAAGACCTGTCAATCC-
 A C G T A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GCGACVTGTCCTTCCC--
----------CTTCCGGT
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCGACVTGTCCTTCCC
-----GTGACCTT---
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCGACVTGTCCTTCCC
----BNTGDCCTTG--
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCGACVTGTCCTTCCC--
--------ATTTTCCATT
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GCGACVTGTCCTTCCC--
--------ATTTTCCATT
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:GCGACVTGTCCTTCCC---
--------NACTTCCGGGT
 A C T G A G T C A T C G C T G A A T G C T A C G A G C T A C T G A C G T A G T C A G T C A C G T A C G T G T A C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T