Information for 3-NCCGCATCTCACG (Motif 4)

C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G
Reverse Opposite:
G T A C C T A G A C G T A C T G C G T A A C T G C G T A C A G T A C T G T A G C A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:NCCGCATCTCACG-------
-----CTCTCGCGAGATCTG
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

CENPB/MA0637.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:NCCGCATCTCACG--
CCCGCATACAACGAA
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:NCCGCATCTCACG---
----ATTCTCGCGAGA
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:NCCGCATCTCACG-----
---ACCACTCTCGGTCAC
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:NCCGCATCTCACG-----
---GGNTCTCGCGAGAAC
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:NCCGCATCTCACG---
------TBGCACGCAA
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:NCCGCATCTCACG
---HTTTCCCASG
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:NCCGCATCTCACG-
------AGTCACGC
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:NCCGCATCTCACG-
----KTTCACACCT
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:NCCGCATCTCACG-
------TCACACCT
 C G T A G T A C A G T C A T C G G T A C G C T A A C G T A G T C A C G T A G T C G T C A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T