Information for 7-CGCCGCCTGGTTAGTG (Motif 12)

A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G
Reverse Opposite:
A G T C C T G A A G T C A C G T C G T A G T C A G T A C A G T C G T C A C T A G A C T G A G T C A C T G A T C G A G T C C T A G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.886
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 8.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGCCGCCTGGTTAGTG-
--TACCCTAGTTACCGA
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T
A C G T A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CGCCGCCTGGTTAGTG
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCTGGTTAGTG
-GCCGCCATCTTG---
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CGCCGCCTGGTTAGTG----
--------RGTTAGTGCCCY
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCCTGGTTAGTG-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGCCGCCTGGTTAGTG
-----ACTAGTTAAC-
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G
A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CGCCGCCTGGTTAGTG---
----GYCTGGYYTNTGTCA
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGCCGCCTGGTTAGTG--
-GAAAACTAGTTAACATC
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CGCCGCCTGGTTAGTG-
------CAGGTAAGTAT
 A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CGCCGCCTGGTTAGTG
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T G C A G T C A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T C G T A C T A G A G C T C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T