Information for 4-TGAAGAATTG (Motif 10)

A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A T G C A A C G T A C G T A G T C A C G T A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.879
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif71.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets45.9 +/- 30.2bp
Average Position of motif in Background48.0 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGAAGAATTG---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGAAGAATTG----
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGAAGAATTG-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAAGAATTG----
AATGAACAATGGAATT
 A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAAGAATTG
AGAGGAAGTG
 A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAAGAATTG-------
GGAAAAATTGTTAGGAA
 A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGAAGAATTG-------
---AAAATTGTTATGAA
 A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGAAGAATTG
AAAGRGGAAGTG
 A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGAAGAATTG---
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGAAGAATTG-
-GAACAATGGN
 A C G T A C T G G T C A C G T A C T A G C G T A C G T A A C G T C G A T A C T G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G