Information for 7-AAAWCCAKCCSTTTAT (Motif 9)

C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A T C G C T A G A C T G T G C A A C G T A C T G A C T G G C A T A C G T A G C T A C G T
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.891
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 23.4bp
Average Position of motif in Background48.3 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT-
-------ANCGTTTANN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

ZNF410/MA0752.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAWCCAKCCSTTTAT----
---TCCATCCCATAATACTC
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT-
NNNTCCATCCCATAANN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT--
---NNNNNNCTTTTATAN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT--
---NNNNNNCTTTTATAN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT---
----------TTTTATTGC
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:AAAWCCAKCCSTTTAT----
--------CCTTTTATAGNC
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT-----
----------TTTTATGGCTN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAAWCCAKCCSTTTAT
---ACCATCTGTT---
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AAAWCCAKCCSTTTAT----
--------DGWTTTATGRCN
 C G T A C T G A C G T A C G T A T A G C G T A C C G T A A C G T A G T C A G T C A T G C A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C