Information for 2-GCAAAAAGCCGCGGCG (Motif 3)

T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
Reverse Opposite:
T G A C T A C G A T G C G A T C A T C G A T G C A C T G A T C G A G T C A G C T A G C T A G C T A G C T A G C T A T C G A G T C
p-value:1e-15
log p-value:-3.474e+01
Information Content per bp:1.351
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 24.8bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG
AGCAACAGCCGCACC-
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCAAAAAGCCGCGGCG--
----CAGGCCNNGGCCNN
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG
--AAAAAGCGGAAGTA
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG
GGAGAAAGGTGCGA--
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCGGCG
GGAACAAAGR-------
 A C G T T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCAAAAAGCCGCGGCG
------CGCAGCTGCG
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG--
---CAAAGGCGTGGCCAG
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG-
--ATAAAGGCGCGCGAT
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG-
--ATAAGGGCGCGCGAT
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCAAAAAGCCGCGGCG
---AACAGCTGCAG--
 T C A G T A G C T C G A T C G A T C G A T C G A T C G A T C A G T A G C T G A C T A C G T A G C C T A G T A C G A T G C A C T G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T