Information for 9-TATATTCGAT (Motif 16)

A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T G T A C A T C G C G T A C G T A A C G T C G T A A C G T C G T A
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.5 +/- 26.3bp
Average Position of motif in Background76.8 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TATATTCGAT---
AAAAAATCGATAAT
 A C G T A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TATATTCGAT--
--TAATCGATAA
 A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TATATTCGAT
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATATTCGAT---
AAAAAATCGATAAT
 A C G T A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATATTCGAT--
--TAATCGATAA
 A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATATTCGAT--
--TAATCGATTA
 A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATATTCGAT----
AATCAATTCAATAATT
 A C G T A C G T A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TATATTCGAT-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATATTCGAT------
-NNATNTGATANNNNN
 A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PAX3/MA0780.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TATATTCGAT--
--TAATCGATTA
 A C G T C G T A C G A T C G T A A C G T A C G T A T G C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A